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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808999.1_cds_XP_016495597.1_9897
CDS Infomation

[gene=LOC107814662] [db_xref=GeneID:107814662] [protein=RNA pseudouridine synthase 5 isoform X7] [protein_id=XP_016495597.1] [location=join(49161..49259,51245..51413,52205..52289,52755..52839,53026..53101,53235..53302,53425..53494,54551..54629,55040..55133,65838..66083)] [gbkey=CDS]
Sequence

ATGAGCAGAGCTGGTACAGAACTAGTATATCATCGACTTCCTTGGAGAGAACCTGATGCA
CCTTACTTGTTACAAGTACTATTTGAAGATGACTATTTGATTGCTCTAAATAAACCTTCT
GGTTTGCAAGTTCTTCCTGGAGGGTTGTTCCAGCAGCGGACTGTCTTGACACAACTCCAA
TGGCATGTGAGCAAGCTGACAACCTCTTCATCGGGTTGTCGAAAAACACATCCTGTTCCA
GTTCATCGCCTAGGAAGGGGTACATCAGGAATACTTCTCTGTGCAAAAACAAAGCTCGCT
AAATCTCGCCTTGCGGCATATTTTGCTGAGGGGACATCGGTTGTTGAAGACAAATACACC
AACTCAGAGTGCAAGAAAATGAGGAAAATTAGCAAGATATATCGGGCGCTTGTAAGTGGT
GTGATTGATATGGATGAGGTTCTCATCAAGCAACCGATTGGGACGATTAAATATCCTGGA
GTTGCTAAAGGGTTGTATGTTGCTTCTCCTTCAGGGAAGCCAGCTCTGAGCAGTGTTCAC
GTTCTTGAAAGAGATTTAGAGAATAAGAGCACATTGGTCCAGGTTGAAATTCAATCTGGA
AGGCCACACCAAATCCGTATCCACCTCTCTTTCATTGGACTTCCACTAATTGGTGATCCT
CTTTATGTTTCTGGCGGGCAACCAAAGTGCTTTGATCCTGAATTAATGGATGAAAGTTTT
GAGAAAGATGGCGGCTATCAAAGACCTGAGAATCCTGTTCCTGGAGACTGTGGATATAAC
CTGCATGCACATCAAATAGTTCTTATACACCCAATCACAAATGAGAATCGGTGCGTGAAC
ATGATAGCACGTTTATTCAGCGTGCCATTGGAAGAGGAGACAGCAATTGGAGTGGGAACA
GTTAGTTCATCGGAGGCCATAATGTTAGCAGGCCTGGCTTTCAAGAAAAAAAGGCAAAAC
AAACGCAAAGCTGAGGGCAAATCTTGTGATAAGCCCATCATTGTCACTGGTGCCAATGCT
CATCTTTTGATGTTTTCTACAATGGAAAGAAATTACTTCTTTTCCATTTAG

Peptide Sequence

PEP ID

XP_016495597.1
PEP Infomation

PREDICTED: RNA pseudouridine synthase 5 isoform X7 [Nicotiana tabacum]
Sequence

MSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALNKPSGLQVLPGGLFQQRTVLTQLQ
WHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCAKTKLAKSRLAAYFAEGTSVVEDKYT
NSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGTIKYPGVAKGLYVASPSGKPALSSVH
VLERDLENKSTLVQVEIQSGRPHQIRIHLSFIGLPLIGDPLYVSGGQPKCFDPELMDESF
EKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNENRCVNMIARLFSVPLEEETAIGVGT
VSSSEAIMLAGLAFKKKRQNKRKAEGKSCDKPIIVTGANAHLLMFSTMERNYFFSI

Transcript Sequence

Gene sequence data has not been registered.